rs30852346 SNP Detail

Summary

• ID
  rs30852346
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:168302200 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGTT CAGGAGGATG CGCTTGTAGT
  Y
  CCAGGGGGAG GTAAGGACAG GAGAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss44970363	mCV23441027	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss146067968	ENSMUSSNP868503	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
ss320093840	CHEV_1_170404762	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30852346					SNP	T	T	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:168302200 () rs orientation: forward

Symbol	Name	Function Class
Gm39696	predicted gene, 39696	1003 bp downstream
Rr422866	regulatory region 422866	340 bp distal
Rr422867	regulatory region 422867	1385 bp proximal
Rr422868	regulatory region 422868	1670 bp proximal