rs30851535 SNP Detail

Summary

• ID
  rs30851535
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:86638437 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCATC TTTACCCAAA GAGCATTCTG
  M
  TATATAAACC CCGAAAGCAT AAAGG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45970328	mCV23944056	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	C	A
ss133358286	ENSMUSSNP6448547	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
ss321846912	CHEV_6_86611449	CHEVERUD	SCREENING_POP	f	SNP						C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30851535					SNP	A	A	A	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86638437 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm44292	predicted gene, 44292			1733 bp downstream
Mxd1	MAX dimerization protein 1			Intron
				Noncoding-Transcript-Variant
Rr633480	regulatory region 633480			506 bp distal