rs30849551 SNP Detail

Summary

• ID
  rs30849551
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:10156212 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGTTAACAC TTAAATTTTT GTATTTCTCA CATTGCGTTT
  TAATCTTTCA TTTACAATTT AGTGTTGACT GAATACCAAT TAATGACTAA GATATGAAAT
  R
  TCTAGTTTGT TAAAGTATTG TTTTCTAAAC ATTAATTCCT GTTATAGAGC AGTGTAATAG
  TTTGAAAGTT TCTTCAAATT GTGTCCCACT TTTCTGTTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45472282	mCV25352393	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss134580067	ENSMUSSNP3451287	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30849551					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:10156212 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm37308	predicted gene, 37308			1197 bp upstream
Myef2l	myelin expression factor 2 like			Intron
				Noncoding-Transcript-Variant
Rr573569	regulatory region 573569			1388 bp proximal