rs30846545 SNP Detail

Summary

• ID
  rs30846545
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:79289174 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAA AAAAAACAGA ATAGTTATTC
  R
  TAACTCAAAA CAAAAACAAA ACACC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45470753	mCV24555813	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	G
ss135371774	ENSMUSSNP7003187	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
ss320811399	CHEV_3_79185789	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30846545					SNP	A	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:79289174 () rs orientation: forward

Symbol	Name	Function Class
Rr578510	regulatory region 578510	1358 bp distal
Rr578511	regulatory region 578511	198 bp distal
Spmip2	sperm microtubule inner protein 2	Intron