rs30845660 SNP Detail

Summary

• ID
  rs30845660
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:81818228 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTCGAATGA GATTCAGAGG TTGTTGGGTA ATTAAGCACT
  GCATGTTCTG GACTGTCGAA TTTTAATCAT GGGAGCTAGA TCTGGAAGAA AATGAAACAC
  R
  TGCTCTTACC TTGCCTGAGA TGATGGTATT TTGAGTCATA CAAGAATCTA GGGTATTGAG
  GCATGCCCAG GGCAGAGTCA GATCCAATAT TTGTCATTA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
ss45470747	mCV23520676	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss135398646	ENSMUSSNP5280630	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
ss320817064	CHEV_3_81714843	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
rs30845660					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:81818228 () rs orientation: forward

Symbol	Name	Function Class
Gm9989	predicted gene 9989	within coordinates
Rr375244	regulatory region 375244	88 bp downstream
Rr578719	regulatory region 578719	within coordinates