rs30844800 SNP Detail

Summary

• ID
  rs30844800
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:76473200 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAAGTATGG CCTTGGACCA
  TGAATTCTTT GTTTCCCTTG TATATTTAAG TTGACCAGAA AACTTCATAT TATTAATTAT
  TTTTAACATA TCAAATAAGC AGAAAAATTG TTTTTAGCAA AATATAAATT ACCTACTCCA
  TGGAACATTG GTATTTGCTC TGTTGGCAAA AAGATGTACT CTTTAAGAGG TCTTTTGAAG
  Y
  TTGACATGAC AAACAATTTC ATAAAGAGGT ATGCAGTTTG AAAAAGAATG CTGTCTCAAA
  ATGTGCCAAG AATATATCCA TGGCTTCTAT AAATTTTCTC TTAATAAACA AGATTGCAAC
  ACAGAAAGCT AAATAATTAT AGATATCTGG GTAAAGTTTC AGACTTGCAG AATTTTGATT
  TCCATTGAAA ACTGTATGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45472124	mCV24200831	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss135341112	ENSMUSSNP2704938	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30844800					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:76473200 () rs orientation: forward

Symbol	Name	Function Class
Fstl5	follistatin-like 5	Intron
Rr578399	regulatory region 578399	1628 bp proximal