rs30841318 SNP Detail

Summary

• ID
  rs30841318
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:96455570 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGTC TGTCTGTGTG TGTGTGTGTG
  Y
  GTGTGTGTGT GTGTGTGTGT ATGCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45471089	mCV22851522	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss320842020	CHEV_3_96352177	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs30841318					SNP	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:96455570 () rs orientation: forward

Symbol	Name	Function Class
Rr397861	regulatory region 397861	585 bp downstream
Rr581314	regulatory region 581314	271 bp distal
Rr581315	regulatory region 581315	684 bp distal
Rr581316	regulatory region 581316	1178 bp proximal