rs30841097 SNP Detail

Summary

• ID
  rs30841097
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:155919172 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGGAAGTA TGCTAATCAT
  AACTTTGCCC ACATTTCTCA GTAGTTCACA GAAATTATTC TCCAAAACAA TTTTGTAACT
  ACGTTAGAGA AGAGGGAGGG GCACATTGCT CACTAGCCTT AGCTTTCACC TGTGTGCATG
  CCCTCTTCAG TTCCCTTCAA AATCCTCAAG ACCCCAAGAA TACTTCTTTG GTTAGGAAAC
  M
  AGATAGAGTA TAGCCTGGTA AAGCTTCCAG TGAGTAAGGA GTAGCCCAGA CAGTCACTTT
  GTGGGTGTGG AAATAATTAA TAATCATGCA TTTCTAAGGT CTCTGTTAAC ACAGATACCA
  CAGGTAATAT GGAAGAGAGA CTAAGTAGCA CTTTCTTTTG GCTATGCCAT AGGTTTTCCT
  AAATGTTTTC AGAGAAACAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47489997	NES10323797	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	C	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30841097					SNP	A	A	A	A	A	A	A	A	A	C	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47489997	NES10323797	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:155919172 () rs orientation: forward

Symbol	Name	Function Class
Rr587947	regulatory region 587947	1421 bp proximal