rs30839240 SNP Detail

Summary

• ID
  rs30839240
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:56044611 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGCTCTGC ACTGGGAAAC
  TGCTGTGGTG GTCTGGGTGA GAATGGCCCC CAGAGGCTCA GGTGTTTGAA TACCAGTTGG
  TAACACTGTT TTAGTAGGTT CAGGGATATG GGCTTGCTGG AGGGAGTATG TCACACAGTG
  GGGGCTTTAA GATCTCATAA CCCTGTGATA TTCCCAGTCT GCTTTCTCTG GTTGGGGCTT
  R
  CAGTTTAAGA TGTGATTCCT CAGCTTCTAC TACAGCCATT ATGTCTCCTG CTCATGGCCA
  CACTTTCCCA CCATGAGCCA AGAAATTATA CAACAGGGAA AAGCTAAGAT CTGTGTAATC
  CACTGATACC ATGCTTTGCA CTGTAATTTA GTGGTTCTTA ACCTGTAGGT CACCACCCCT
  TTGGGGAATC ACACATCAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45969412	mCV24073360	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss133220661	ENSMUSSNP3799104	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs30839240					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:56044611 () rs orientation: forward

Symbol	Name	Function Class
Rr379404	regulatory region 379404	1041 bp downstream
Rr631046	regulatory region 631046	431 bp distal
Rr631047	regulatory region 631047	771 bp distal