rs30838763 SNP Detail

Summary

• ID
  rs30838763
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:61535301 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATATTTTG ACCAACGTAT
  ATTGAAGGAA TACAGAGTAT GTGACGTCTT CAACTAATTT CTGGGAAAAG AACATATGAC
  TAAAGTGTCT CATAGTCCAA AACAGCATCA ATTCTCAGAA AATTAGTAGA AGAACCATCT
  GTGCTGAATA GACTAATATT TGTCTTTTAC AGTAGTTTAG GTGAGCAATT CAGAGTCATT
  R
  TAAGCTTACT GGTCAACTTA GGCTTTTACT TTTTATTGAC ATTATCTTCT CTGGAAAGTG
  CAGTCATTTG TATCATCTTC TCAGTTGCAT GATGCAATAT TAAAAGTCCT CTATTCTGAG
  ATTCAGTCAT GGGTAAATTA CAAGTGTTTT CTTTGTGCCT TGTAATGTCG TGTAATACCT
  TGTGTTTGGG AAGGGTCCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss46989884	NES10789709	PERLEGEN	MM_PANEL2	f	SNP	A			A	A	A		A	G		A	G	A
ss135226340	ENSMUSSNP2867309	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A				A			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs30838763					SNP	A	A	A	A	A	A	A	A	G	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46989884	NES10789709	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:61535301 () rs orientation: forward

Symbol	Name	Function Class
Rr577497	regulatory region 577497	266 bp proximal