rs30838758 SNP Detail

Summary

• ID
  rs30838758
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:61533670 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTCTTATC CCACATTGTT
  TTTGGTCAGT GTTTTATCAC AGCAATAGAA AAGCTAACTG GAACAGGGAG GTTTGAAGTA
  ATGTGTGTTG TTGGCACTGT GATGCTGAAC AGGAGCCTCT ATGTGTTTCT CTGAAATAAT
  AAAGCAACAC AGGCTTTATA AAAAATACCA CTGCAGGAGA TTCCTAATGC TTCCCAGACT
  R
  GAATCTAAAT GAATACAGTA ATCAGAATAA TACCATCCTG TACCCTCCCC ATCTGCCTCA
  AACACTGCTG CCAAGCCAGT ACCAAGACAT TAGGGAATGT ACCCTAATTT CTAGAGTTCA
  CTGCATTGCA GTTGGAAGGA AGGTCCTGAG CAGGCTAACT CTCAGGGTAG CCACATCTTC
  TTAATGTCTC AGAGCAATCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss46989878	NES10789706	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs30838758					SNP	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46989878	NES10789706	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:61533670 () rs orientation: forward

Symbol	Name	Function Class
Rr577497	regulatory region 577497	1897 bp proximal