rs30832194 SNP Detail

Summary

• ID
  rs30832194
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:130301145 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTAACCAC TGAGTACCAA
  CAGTGTCGAA TTAAAAAGGA GGAAAGCAAA ATTATGAGGC CTGACCAGAT CTCTCTGCGC
  TCTTTGCACT GCAGCTGGGT GATTGTGGGT CTCCCCTCCA GCTCATCAGG AACCTAGGCA
  CAAGCCTGAG TAACTTGCTG TTCCTTTTAA AGTCTAATCC AGTTTTTATT TTGGATTGTT
  S
  CTTATCATTT GGAGGCTCTA TGCATTCCTG GGGGCATTTA AGATGAGGCA GGTAGCCAAA
  AAATGAATCA CTGTTCTTTT TCAGGCTAAG GTCAGTGGGG GACTGAGGAG GAATCCCATG
  GCTGCTTCTC CACTTGTGCT CTCTGGTCAG ATCGCTCAGG ATGCTGCTGA CCATGTGCTT
  TCCCTCAGGA TCACTGAGAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49674820	NES12991702	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	G	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30832194					SNP	C	C	C	C	C	C	C	C	C	C	G	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49674820	NES12991702	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:130301145 () rs orientation: forward

Symbol	Name	Function Class
Rr417908	regulatory region 417908	961 bp distal
Rr417909	regulatory region 417909	1059 bp distal
Rr417910	regulatory region 417910	369 bp proximal