rs30826518 SNP Detail

Summary

• ID
  rs30826518
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:136857442 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTACTACTAC TACTACTACT
  ACTACTACTA CAAATGAAAT ATCACTTTGG CTGGAAGTTC CAAGATCTGA AAGGAGGTTT
  TAACCCAAGT GGCCGCATGA ATCATAAAGT GGTCACAGGA TTGGCTTCAA TGAGCAATGA
  CTAACAATTC TGGGAGCAAT GTGGGTCTAA TCAGATACCT CATCTTAAAG GAGCTGGGTC
  R
  GAATTCCAGA AGGGCAGAGA CAACTGGGAA TGTCTCCAGG ACTTGAGCAG GCTTCATGGC
  ATGTTAATGG GAGAAAAAGA TGAACCATTT AAAGTAAGTG TTAATACAAT TAAATTACTG
  GAGGTAGAGG AGTCTGCAGG GAAAAACCAA ACTGGAGAGG AAATAGGGAG GAAAAATCAC
  CACAAATTCC TCTCACTCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	FVB/NJ	KK/HlJ	PWD/PhJ	WSB/EiJ
ss46988949	NES10875289	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	FVB/NJ	KK/HlJ	PWD/PhJ	WSB/EiJ
rs30826518					SNP	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46988949	NES10875289	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:136857442 () rs orientation: forward

Symbol	Name	Function Class
Rr375787	regulatory region 375787	1042 bp upstream
Rr585922	regulatory region 585922	690 bp distal
Rr585923	regulatory region 585923	1630 bp proximal