rs30823726 SNP Detail

Summary

• ID
  rs30823726
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:72871232 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TACAAGTCAG GTAAACACAG CCTGGTGGCA CAGACCAGTA
  CCACCAGCTA CAATGGAGGC TGAAGCAAGA GGATCACATG TTCAAGGCCT GCCTGAGACA
  K
  TGTAAGTTCA CAGAGTAAAG AAGACTGTAT CAAAACTTTA ACTCCCTTGT CTAGTATGCC
  AGAGACTCTA GGTTCCAGCC TCAGCACTGC AAAAGAACT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45968873	mCV22364478	ABI	CRAMUS_MOUSE	f	SNP	T	T	G
ss133287880	ENSMUSSNP2648597	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		G
ss321823124	CHEV_6_72844243	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30823726					SNP	T	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:72871232 () rs orientation: forward

Symbol	Name	Function Class
D530018E20Rik	RIKEN cDNA D530018E20 gene	713 bp downstream
Kcmf1	potassium channel modulatory factor 1	Intron
Rr632326	regulatory region 632326	827 bp proximal