rs30812385 SNP Detail

Summary

• ID
  rs30812385
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:86769451 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAAA GGCAAACGTA CACCTGATTT
  R
  TTTGGAGCCA AGGATAAAAC CCAAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45967649	mCV22848121	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss133359397	ENSMUSSNP6665001	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss321847284	CHEV_6_86742463	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30812385					SNP	G	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86769451 () rs orientation: forward

Symbol	Name	Function Class
Anxa4	annexin A4	Intron
Cpgi17670	CpG island 17670	463 bp proximal
Rr633514	regulatory region 633514	1627 bp distal
Rr633515	regulatory region 633515	261 bp proximal
Rr633516	regulatory region 633516	1105 bp proximal
Tssr57508	transcription start site region 57508	1735 bp downstream
Tssr61864	transcription start site region 61864	1053 bp downstream
Tssr61865	transcription start site region 61865	1121 bp downstream