rs30811030 SNP Detail

Summary

• ID
  rs30811030
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:90338350 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGT CAATATGACA AGGCTTCCCC
  R
  ATGCTGGTGC CTGAAGTCTT GCAAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45968122	mCV23962803	ABI	CRAMUS_MOUSE	f	SNP		G	G					A
ss60907158	NES15949594	PERLEGEN	MM_PANEL2	f	SNP	G		G	A	A	G	G		G	G	G	G		G	G	G	A		G
ss133377508	ENSMUSSNP7092976	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G
ss321852234	CHEV_6_90311362	CHEVERUD	SCREENING_POP	f	SNP													A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30811030					SNP	G	G	G	A	A	G	G	A	G	G	G	G	A	G	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60907158	NES15949594	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:90338350 () rs orientation: forward

Symbol	Name	Function Class
Rr634185	regulatory region 634185	1643 bp distal
Rr634186	regulatory region 634186	497 bp distal
Tssr57640	transcription start site region 57640	1932 bp upstream
Uroc1	urocanase domain containing 1	Intron