rs30809432 SNP Detail

Summary

• ID
  rs30809432
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:117095713 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAATGATG TAATTATATA
  TAGTTTATAT AACCTCAAAA AAAACCCAAA AGAAATAATT TTGAAAGAAC AAATTTGAAA
  CAAAAGAAAT GTTAAGGCCC CAAGTGAGGA TGTCTCAATC CCACTTGAGA GGGAGAAGAA
  AGGAATCAGG GTGGGGCTGG GGCAGAGAGG AGATAGGGAG AGGACAAGGG GGAACATGAT
  Y
  AGCTATTGGG CAGGTAAGAA ACAGGTAACC TCGGGAGGTA GGAGGTGGGG TGACCCTCTA
  GGATGTACCA GAGACCTGGG AGGTGAGAAG CTCTCAGGTC TCAAAGGGAG GGACCTTAGA
  TGAAATGCCC AACAGTGGGG AAAGGGAACT TGTAGAGTTC ACCTCCAGTA GAAGGATAGG
  GCATCAAGTG GAGGGATGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45468562	mCV25192297	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss135687800	ENSMUSSNP2586022	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30809432					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:117095713 () rs orientation: forward

Symbol	Name	Function Class
Rr583839	regulatory region 583839	897 bp distal