rs30808366 SNP Detail

Summary

• ID
  rs30808366
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60706337 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTACATAGAA AGTATCATCC
  CAAGCTGAAA CCTACAGATT TGTGTAAAAC TTCTTAATTC ATCTGCAAGG AAGCACAGAG
  GCCATTCCCT GACTTGGAAG ATAGTACTGG AGCAGAGGAT CAGAGGCAGG ACAATCATAA
  AACTGAAGTT TGCTTACTCA AGTTTCCACG TAAACCAAAG CTACTATGAG TCTCAGGCAG
  R
  AGAGTCCCTT GTATAGGCGG CACATTTGCT GACTGGCTGT TGTTGGCCAC GAGGCTGCAT
  TTGACTGGAA CTGAGGGAAG TTGCTGGGTG TGAGCATCTT CATGCTGTAT CATGTTCAAA
  GTGGATTAGT GTCACTAGGC AATGATCTCT TTCTGTAACA AGTTACAACG ACTAACTGGG
  CTCTGTCTGT ACAACACAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ	WSB/EiJ
ss45559878	mCV25047355	ABI	CRAMUS_MOUSE	f	SNP	A	A	G				A		A
ss46985696	NES10789325	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	A	A		G	A	A	A	A	G
ss135221033	ENSMUSSNP1186875	ENSEMBL	ENSEMBL_Sanger	f	SNP			G						A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ	WSB/EiJ
rs30808366					SNP	A	A	G	G	A	A	A	G	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46985696	NES10789325	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60706337 () rs orientation: forward

Symbol	Name	Function Class
Gm37035	predicted gene, 37035	within coordinates
Rr577459	regulatory region 577459	807 bp distal