rs30808084 SNP Detail

Summary

• ID
  rs30808084
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:104493623 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAACAAAAGG CTGAAGCACC
  TATTAACAAA ACCAAAGCGA ATGCTGAAGG CCAGGTTCTC ACAACATCCC TCAGTTCCTA
  CCCAGTGCGG AGTCCTCCTG GCTGGCATAC TCACCTCTTA CCCTGAAGTC TCCAGCCCAG
  GAGACTTGCC TATATAACCC AGCCATTCTG GTTACATTGG CTTTTTTTTT TTTTTTAATC
  K
  TTTTGAACTT TTCCCATCTT GGCCACTTCT CCTGGCTCCC CTCTCTCCCC TCTCCCTTCC
  TCCTCTCCTT CCAAGGCCTA GCTCAGGGTC GTGCTCATTG GGCTCTCCCA GATGTTCCTG
  CCTCTGGCTA TGCTCTCCCT CATGTCTACA GTGAACCCTC TCCTCCGCCT CACCCAGGAG
  CAGTAATGAT CTCCTTTTAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45469297	mCV25401301	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30808084					SNP	G	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:104493623 () rs orientation: forward

Symbol	Name	Function Class
Gm64517	predicted gene, 64517	within coordinates
Rr582544	regulatory region 582544	657 bp distal
Rr582545	regulatory region 582545	506 bp distal