rs30808073 SNP Detail

Summary

• ID
  rs30808073
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95873392 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCTT AGCAGAAAAC ATGACTGACC
  S
  ACCGGGAAAT GGTTAAAGAG CTATG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	SM/J	WSB/EiJ
ss45469037	mCV27558404	ABI	CRAMUS_MOUSE	f	SNP		G	G					C		C
ss46778297	NES10733603	PERLEGEN	MM_PANEL2	f	SNP	G			C	G	C	G		G	C	G	G		G	G		G
ss135513272	ENSMUSSNP876934	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G							C
ss320841283	CHEV_3_95770003	CHEVERUD	SCREENING_POP	f	SNP													C			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	SM/J	WSB/EiJ
rs30808073					SNP	G	G	G	C	G	C	G	C	G	C	G	G	C	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46778297	NES10733603	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95873392 () rs orientation: forward

Symbol	Name	Function Class
Gm20940	predicted gene, 20940	1692 bp upstream
Rr581106	regulatory region 581106	within coordinates
Rr581107	regulatory region 581107	62 bp distal