rs30807596 SNP Detail

Summary

• ID
  rs30807596
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60705609 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTCTGTTT TTTCCTGCTT
  GAGCAATCGG AGTCCTGTGG GGGAGTTGAT TCAGCCCCAG CTGTACTATT GTTATTCAGA
  CTCGCTGCCA AGCGTCTGTG CAGCCCGCTT TAGAGTTGGC AATGGCATGG CAGAACTGTC
  CTTCCAATTG GGGTGTCTGG TAAGTCCTGG TCCCTTCCAC GCTCTGTTTG TAGGACTGTC
  R
  GCTTTAGCAA GTGGACTAAA AATTTAAGCG GAATAGGCCC CCTCTCATTA CTGAGCTCAT
  TTTGTATTTC TTGTTACAGT GGCCTTCTTA GTAGTAACTT GGTCAATTAA AATAACTTTA
  GAAACACGAT GGTGTAGAGT ATGTGTATAC TTCAATGTAG ACCGTCCAGA CTGGCTTGAC
  TAGGAGATGA TAAAACATAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46985686	NES10789320	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	A	A	G	A	A	A	A	G
ss135221015	ENSMUSSNP4821390	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30807596					SNP	A	A	G	G	A	A	G	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46985686	NES10789320	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60705609 () rs orientation: forward

Symbol	Name	Function Class
Gm37035	predicted gene, 37035	within coordinates
Rr577459	regulatory region 577459	79 bp distal