rs30807371 SNP Detail

Summary

• ID
  rs30807371
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:95630829 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGCTCCCTCA GTCTAGAGCA ACTACTCTCT GAGTGTGAAC
  CTGCCCGCTT GCTTGTCTGC TTGCTCACTG AATGAGCTGC TCTCTGAGTG TGAACCTGCC
  Y
  GCTTGCTTGT CTGCTTGCTC ACTGAATGAG CTGCTGCCTC AACACCAGGA CTCTGCCTCG
  GCCTTGAAAA ATGGGCCAAG GAAAAGCTAA GACCAACTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45966944	mCV22716850	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss133409323	ENSMUSSNP232809	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30807371					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:95630829 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr635025	regulatory region 635025			1949 bp distal
Rr635026	regulatory region 635026			704 bp distal
Suclg2	succinate-Coenzyme A ligase, GDP-forming, beta subunit			Intron
				Noncoding-Transcript-Variant