rs30806806 SNP Detail

Summary

• ID
  rs30806806
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60704933 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAGGCATGC ATGTGGTTAT
  TACCAGAGAC AGTGGTGTGT GTAGGCACTA AGCCCAGAGA AAGGGCTGAA CTGCAAGGGC
  TCGCTGAAAC CATCACAGGC ACTTGGCAGG GAGAGCTCTG AGGAGGGTTG TGATGGCCTT
  AGATGAGAAC AGAAAATTGC AAGCAAATGC CAGTGAAAAG GCACAGAAAC ATGAGACCCA
  M
  GAAGAGAATG AGGCAGTTAT GCGGGAGAAG AGGAAGAGGC CCAGTGAGTA GAGCACAGCG
  CCACAGACAC TTAGGAGAGA GGGAGCACGG TGAAGGAGGG GCAAGGAAAA TCTCTCTGGA
  GCTGCTGAGA AAACAGGTAA TGAAGTTGTC TGAAGTGATC ATTGGCAGTT CCCAGGAGAA
  GAGTGCTGAG ACAGTTCCAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46985676	NES10789311	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30806806					SNP	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46985676	NES10789311	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60704933 () rs orientation: forward

Symbol	Name	Function Class
Gm37035	predicted gene, 37035	within coordinates
Rr577459	regulatory region 577459	314 bp proximal