rs30805469 SNP Detail

Summary

• ID
  rs30805469
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60693752 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAGGGTCAA GCCAAGCCTT
  AAGGAAGAAA GGCCTTAAGG AAGAAAGGTT TTCTACTTAA TCTTTGAGTT TTTGTTTTCA
  CACAGCTGGG GTAATTAGGT ATGGCCTAGG AAAATTTATT TCTTGGAATG GAAGATGGCA
  GTACAGAACT CAGAATGCAG TCTCCACTGG GTTTGGAACT CCTTGTTAAA AGGATCTTTT
  Y
  ATTTTCCAAG ATGTCTAGCC TATCTCTTGA GAGCCGGAAA CTAGGAATGA ATATGTACTG
  AAAGATCAAA CTAGACATTC TACATATATT TGGAACATTT TCTTTTTATC TAACATATTA
  CCATGAAGAT AATAGTTAAA GTGATATATC TATGACATAC GGTGTGATGT TTTGAAATAT
  CTATATATTA TGAAATATTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46985560	NES10789582	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C	T	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30805469					SNP	T	T	T	T	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46985560	NES10789582	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60693752 () rs orientation: forward

Symbol	Name	Function Class
Gm37035	predicted gene, 37035	within coordinates
Rr577457	regulatory region 577457	267 bp distal
Rr577458	regulatory region 577458	1839 bp proximal