rs30804706 SNP Detail

Summary

• ID
  rs30804706
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60703285 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAACTTTCT GCCATATCTA
  TCAGGTATTT CTATCAAAGA AATGAGAAGA GTCACAGATG CTTTGGCTGA GGTTATCTGG
  GACCCCTTAT ATTCAGTTTA CAGGAAGATT CTAAATACTA TAGGAGGAAG ACTGAGCATT
  TGCGTTCTCC ATACCCTTAA ATGCATTTGC TGTGATGATT AGCAATGTGA TGCTGATACT
  Y
  AGTTTACTAA CTAAGATTCA TTTTTGCCCT GTAATGCTAT TCAGTATTCA CTCCTGTGGA
  TAATTTACTA TCTTTGCTGA TAGTAGTCTT TAGGTAGCTC TTCAGTCAAT GCAGGATTGC
  TGATGTTCAA ACCCACAAAA AGAGCTCTCC AGAAATCGTC CCTTCCTTGT CCCCACAGGG
  GTGCCTGGTT GAGAAGAGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss46985646	NES10789289	PERLEGEN	MM_PANEL2	f	SNP	T			C		C	T	C
ss135220929	ENSMUSSNP793164	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs30804706					SNP	T	T	C	C	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46985646	NES10789289	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60703285 () rs orientation: forward

Symbol	Name	Function Class
Gm37035	predicted gene, 37035	within coordinates
Gm38326	predicted gene, 38326	1136 bp downstream
Rr577459	regulatory region 577459	1962 bp proximal