rs30804698 SNP Detail

Summary

• ID
  rs30804698
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60692437 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGGAACAT TCAGAAATCA
  GCTTTTGTTC ATGGGAGATG GTTTTTACTT CCTCAGTAGC CACAAAGTGG GAAATTTCTC
  ACGCATGGAG AATGAAGGAT GGTGCTGGAA AAGAATCATG CCTGTTTATT ACATTTAGGA
  CTAAAAGCTC TGTTTTGGTG ATGTAATTAG CTTGTGACAA AAGCATATTA CTATTAAAAT
  K
  GTCATAATCA CCTAGGGTTA GCTGAATGAC ATAATGTGTC TTGGTTCTGA TAATTCAAGG
  GATATCTTAT TATGGTGTTG GGAAGAGATG GAAGCCAAAA ATCACTTTCT GATTTTTCTG
  TACTAACACC AAAGAAACCA AAGAATCCTT TGCCTCAAAA GCAGCTTTTA CAAAAAAAGC
  AAGTCTTACG TCTCCAATTA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46985548	NES10789576	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	G	T	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30804698					SNP	T	T	T	G	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46985548	NES10789576	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60692437 () rs orientation: forward

Symbol	Name	Function Class
Gm37035	predicted gene, 37035	within coordinates
Rr577456	regulatory region 577456	1530 bp distal
Rr577457	regulatory region 577457	within coordinates