rs30804696 SNP Detail

Summary

• ID
  rs30804696
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60692175 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATAAAGATT TTACTAAGTG
  GGCCATAAGC TAGGGTTCCA GTTCGTTTTG TATGACCAAC TCAAGACAAG CAGAAATGAT
  CCTTGGTCAA CATCAAGATC ACCACTCCTG AGCTCAATTC CCGTGTATGA TATTTATACC
  GCTGGGGCAG AAAACTCCTG TTACCATAAC CTCATTGACC TTTCATTCTC AGCTCACAAA
  K
  CAGCCTAGTC CACGATAGTC TTTTACTTGT AAATCCCAAG ATTGCTGCCT GTGGCCCAGC
  TTTGGGAACA TTCAGAAATC AGCTTTTGTT CATGGGAGAT GGTTTTTACT TCCTCAGTAG
  CCACAAAGTG GGAAATTTCT CACGCATGGA GAATGAAGGA TGGTGCTGGA AAAGAATCAT
  GCCTGTTTAT TACATTTAGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46985546	NES10789575	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	G	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30804696					SNP	T	T	T	T	T	G	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46985546	NES10789575	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60692175 () rs orientation: forward

Symbol	Name	Function Class
Gm37035	predicted gene, 37035	within coordinates
Rr577456	regulatory region 577456	1268 bp distal
Rr577457	regulatory region 577457	within coordinates