rs30803656 SNP Detail

Summary

• ID
  rs30803656
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101270716 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAAAGCATT TTCCAACATC
  TGGTGTGATG GAAAATAGTT TATGTAGTTC AGGGTTTATA TTTTAGGATT TTTCCCTTTA
  ATATATCACA CATTTCAGTT ATGTGTTGGC TCGTTCGTTC TTGTGGAGTA CTAGTTCCAC
  GAGGGCAGGG TGTCCTTCTG TCTTTTCTTC TTTGAGTGGT GCCTGGAATA GAACACACTG
  Y
  ACTTAGCGGA CGCCTAACCA CATCTGTTAA GTGGCTGATC CTGAACATGT CCTGAGTGCT
  GCCATTTCCC ATGCTAACTT TATCAGTCGC TCTTTTCAAT TCCGTGACAA AATGGCGGGC
  AAAGACAACT TACAGTGGAT GTACGGGTTA TGCTCCTTTC TAGTGGGAAG CGATGGTGGC
  GGGAGCAGGC TGTGACTGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45467287	mCV23815578	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss135546814	ENSMUSSNP3895156	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
ss320851951	CHEV_3_101167323	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30803656					SNP	C	T	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101270716 () rs orientation: forward

Symbol	Name	Function Class
Rr582021	regulatory region 582021	618 bp distal
Rr582022	regulatory region 582022	143 bp proximal
Rr582023	regulatory region 582023	1713 bp proximal