rs30802177 SNP Detail

Summary

• ID
  rs30802177
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:156445691 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGGGCTTG CTGCTCATCT
  CTAATAGTGC CTGCTGTGAG TTTGCAAGCC ACACATTATC CTTCAGCAAA CCTTTTGTTG
  TGTGCTGGGT AGTTTGTTTG GAGATGGGGT CTTGCTATGT TGTGCTTATG TGATGTGGGA
  CTTAACATCC TCCTCCCTTA GCCTCTGGAG TGCCCGTGTT ACAGCCATGT GCCACATGCC
  K
  GGGACTTTGG TTGGTTGGTT GGTTTTGGTT TTTGTTATCT TTTTAAAAAA GCCTCTTGTA
  AATAAGCTCT TGGGGGGGGG GGGCAGCAGC TGTTGTTGTT CTGTGTGTCT GTACTTATTT
  GTCAATGAAC AAATAAGAAA CTTCCTGGCC TCAAAACATT GCACCCAAGA GACTTAGGTA
  CTATACATGC ATGTAGGAGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss44964673	mCV23342381	ABI	CRAMUS_MOUSE	f	SNP	T	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30802177					SNP	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156445691 () rs orientation: forward

Symbol	Name	Function Class
Abl2	ABL proto-oncogene 2, non-receptor tyrosine kinase	Intron
Rr421203	regulatory region 421203	1708 bp distal
Rr421205	regulatory region 421205	572 bp distal