rs30801663 SNP Detail

Summary

• ID
  rs30801663
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:16997605 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACCAGCCTA CATTTAGTAC
  CACTGAGACA GAGGAGTTCC TTTTAAGCAG TGGGCATTGC TAGACGCAGA AACCCACAAC
  TGGTCAAAGT GGAAAGGAAA AGTGATAGTA AGCCCTGAAC AGGATTGCTG TGTCAGCACA
  CCCAAGGCTT TGAGATCTTC AAGAGAAACG GGGCAGAAAG ATGTTAAAAA CTAAAGATAG
  Y
  AGACAACTAC AGTTTAGCAG TGTTTTCTGG ACACAACGGG GCAGTTGCAC ACAGGAACTC
  GTAGTAGCTG TGACAATATG CATAAGACCT GGGACATGTG CAAGACCAGT GAAAACAAAT
  CAAGCCAGAC AAAATCCCAG TGTGGATGGG AGAGAGGTTA ACAAAGTCCC ACCCCTAGCT
  AAGAAAGGGT TAACTGGCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45965027	mCV24739147	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30801663					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:16997605 () rs orientation: forward

Symbol	Name	Function Class
Gm67154	predicted gene, 67154	within coordinates
Rr626742	regulatory region 626742	1624 bp distal
Rr626743	regulatory region 626743	1890 bp proximal
Rr626744	regulatory region 626744	1924 bp proximal