rs30800912 SNP Detail

Summary

• ID
  rs30800912
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:50753249 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGACCAACC CCTATCCATT
  CAGAAGCCAT TCGGTGTCCC TTCTTCAATT AGTTCCTTAT CGTGGGGCTG CTGAAAGCAT
  TGTGAGTATC CAGAGATGAA TTAATGAGGG CTGAAAAGAT CCAGAGATAG TTACATGCAA
  AGATGAAAAG GGCCCATTAG AATATCGGGA TAAATAAAAT CTGCCCTCCG CCCATTTCAG
  R
  AGACTTAATG GAACGTCGCA AAGTGTTCAG AAGGAGTTGT TCTGAGGCCT GGAGGGAGGC
  AGACACCGCC ATTCCTGTCT GATACTTGGG GCTGTAGCTG CTGCAATCCA CTCAGGCCCT
  CAGCTCTGGT CCAGGTCAGT GTGATGTTAG GGATAAATGT GTGTGGGGCA TCCTTAGAAC
  AAAGCCAGGG AATCGGGAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45965114	mCV22334781	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss133184543	ENSMUSSNP2654760	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30800912					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:50753249 () rs orientation: forward

Symbol	Name	Function Class
C530044C16Rik	RIKEN cDNA C530044C16 gene	within coordinates
Rr543	regulatory region 543	within coordinates
Rr630065	regulatory region 630065	within coordinates
Rr630066	regulatory region 630066	11 bp proximal