rs30797855 SNP Detail

Summary

• ID
  rs30797855
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:149052762 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGTG TTTTTTTTAA TTGTATTTAG
  Y
  AACCCTCGGT TATTTTTATT CTTTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45464948	mCV24057793	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss136070132	ENSMUSSNP2172105	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss321018534	CHEV_3_149010089	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30797855					SNP	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:149052762 () rs orientation: forward

Symbol	Name	Function Class
Gm30382	predicted gene, 30382	within coordinates
Rr587309	regulatory region 587309	195 bp proximal
Rr587310	regulatory region 587310	446 bp proximal
Rr587311	regulatory region 587311	1359 bp proximal
Rr587312	regulatory region 587312	1995 bp proximal