rs30796415 SNP Detail

Summary

• ID
  rs30796415
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122065582 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTGTAATGG TGCTGGAGAT TGAACTCTGG GTTCTGCAAT
  TGCAAGGCAG ACACTTTCCC TCTGAGTCAC ATACAGAACC CACGCTCAAA TGGTCATTTA
  Y
  ATAACTCCCA GGTAGTTTTC CTCAGCATGT TTGTTTGTTT GTTTGTTTGT TTGTTTGTTT
  TTCAAGATAG GGTTTCTCTG TGTAGCCCTG GCTGGTCTG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45465817	mCV22780974	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss135737951	ENSMUSSNP4327851	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
ss320909959	CHEV_3_121974851	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30796415					SNP	T	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122065582 () rs orientation: forward

Symbol	Name	Function Class
Gm17494	predicted gene, 17494	within coordinates
Rr584271	regulatory region 584271	1756 bp distal
Rr584272	regulatory region 584272	118 bp distal
Rr584273	regulatory region 584273	1965 bp proximal