rs30768008 SNP Detail

Summary

• ID
  rs30768008
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:7829810 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAGTAGGGA CTCCTCACAT
  GGTGGTAAAT CAGAAAACAT AGAAAAAATA GGTCAAAATC AGGGTGGTTA TAACCTTCAA
  AGACCTACCC CTTGTGATTA GGTCCCACCT CCTAATGGCC ACACAGACTC ATTAACTTGA
  GAAGGAAGTC TGGTTTATGT CTTCTGAAAC ATTATCCTGG AAGAAGCAGA ATCGCCACAG
  S
  TTTAAGACTG CTGCCTCTTT GTGTCTGACT CACTGCCACT GGGTCAGCCT GTGGAGGAGA
  ACACAAGGGA AGGCAACAAG ATCACCAGGA AACTTCCTTA GGGCTTTCAA TGGCCTAGCT
  CTCTGCTGTA AAGACTGGAC TGTTTGCTAG GGCTTTCACA AACCTGGCTA ACCAGTCCCC
  AGCTTTCTGC CGTTTGTTTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45963531	mCV24004125	ABI	CRAMUS_MOUSE	f	SNP		G	C					C
ss60861856	NES15993153	PERLEGEN	MM_PANEL2	f	SNP	G		C	C	C	C	G	C	C	C	G	C	C	G	G
ss132955717	ENSMUSSNP4502821	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30768008					SNP	G	G	C	C	C	C	G	C	C	C	G	C	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60861856	NES15993153	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:7829810 () rs orientation: forward

Symbol	Name	Function Class
Rr626323	regulatory region 626323	1038 bp proximal