rs30766857 SNP Detail

Summary

• ID
  rs30766857
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:83729345 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCCAGGTG CTTGAAGTGG
  CTGGGACCAA GGCCATTGTT CAGGTAAGTG TACCAATTCT AAGAATGAAC TCACAGTTCC
  AATGCTATCT TACAAGCCTT GGAGGGAAGA CAGACCTATG TCCCAGAGAA CACCCTGCTC
  AGAGCTGCAC ACTGTGGGCC TTCAGTGGGA AGCCCCACTC TTTTCAGACA AGCCACTCAG
  M
  AATGATGCCT AACTCACAGG TGTTTGAAGG GACTTCAGGG ATTGATTCCC AGAAGACCAC
  ATGTGAATTC ACAGGGGACA TCCTGCGGAC TCCTGTGTCA GAAGACATGC TGGGTGAGAG
  TGGGGAAGAT ATTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC
  TCTCTCATCC CTAGTGCAGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45962582	mCV22373497	ABI	CRAMUS_MOUSE	f	SNP	A	C	C
ss133350018	ENSMUSSNP5638257	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30766857					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83729345 () rs orientation: forward

Symbol	Name	Function Class
Atp6v1b1	ATPase, H+ transporting, lysosomal V1 subunit B1	Intron
Gm66892	predicted gene, 66892	within coordinates
Rr632931	regulatory region 632931	1614 bp distal
Rr632932	regulatory region 632932	1861 bp distal