rs30764080 SNP Detail

Summary

• ID
  rs30764080
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:133089863 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGTTGGTTT ATTTTCTTTT
  AATGTGCGTG GATTCCATTC CTGGAGTCAG GAAGCTCATT TAATCTGAAG ATACGGTTCT
  AAATACTACA CTTCCCACCC CCAAAGTTGC CTTATTGTCA CCTAAAATCC TGCTTACCAT
  CAGAACCTGG GTTAAAATCC TTTCTGAATG ACCTCCTCTG CTGTGCAGCC TCAGTGGGCA
  Y
  GAGCAACAAC AGCCTAGAGT CAAGACAGAA GCAGCCCAAC CCCGACTCTT CACACATCCC
  TTGGACCTTC TTAATGCAAC CTAGAACGCT GTGTTGCCTT CCCACTGAGT GGTTCCTGCT
  ACCCATCCGG GCTTTTTCTC TGGAGGAATC TGGCCAGCAG TCATTTTGAG AGTTCTCACA
  CAAGATTCCT CTAATGCTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46981540	NES10868408	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30764080					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46981540	NES10868408	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:133089863 () rs orientation: forward

Symbol	Name	Function Class
Rr585546	regulatory region 585546	1068 bp proximal