rs30764074 SNP Detail

Summary

• ID
  rs30764074
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:133089709 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTAGCAAT CCGTATTTGC
  TGAGTTACAC CGATATGGTG CCTCGTGAGA AAGATGGATG CTTTGTTTGT TTGTTTTTGT
  TTTACTTATC ACGTGTTAAG TTTATAGAAG GCAAATGGAG TACTGGAAGT TACAGGCCCT
  GTGCCAGTTG CTTCACGTTG GTTTATTTTC TTTTAATGTG CGTGGATTCC ATTCCTGGAG
  Y
  CAGGAAGCTC ATTTAATCTG AAGATACGGT TCTAAATACT ACACTTCCCA CCCCCAAAGT
  TGCCTTATTG TCACCTAAAA TCCTGCTTAC CATCAGAACC TGGGTTAAAA TCCTTTCTGA
  ATGACCTCCT CTGCTGTGCA GCCTCAGTGG GCATGAGCAA CAACAGCCTA GAGTCAAGAC
  AGAAGCAGCC CAACCCCGAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss46981534	NES10868405	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs30764074					SNP	T	T	T	T	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46981534	NES10868405	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:133089709 () rs orientation: forward

Symbol	Name	Function Class
Rr585546	regulatory region 585546	1222 bp proximal