rs30761911 SNP Detail

Summary

• ID
  rs30761911
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147511242 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                                   
  AAAATTTAAC AGAAATACTT ATATAGAAAA ATCATTTGCG AGTCTTGAGA TAACTCAGCC
  AGTAGAGGCA AACAATCACA GGACTGGCAA TCTGAGTTTG ATCTGTGGAT CTCACAAGGT
  GGAAGGAAGA GAATCTATAC CTTAGAGTTG TCCTCTGACC TACAGAAGTG CCAGGCAGGA
  CCCTCCCTCA CCTCACACCA CTCCAAAGGG GTCTGGACAT AGGGGTTTTA ATGTACTTAG
  CATGAAAGGC TTATCTAAAA CTAAGACAAG TTCAGAAGAA TTGCCATAGA AGACAAAAAC
  Y
  GAAGCTGTTA GAATTTAAAG AATACTTCAG GCTAGTTTTG GAAGCCCTAC CTACTTTTCT
  GAATGCAACA ATTCTCTTAT TTGAAACATT GTCCCATTAT ATCAAAGGGA AACATGAAGT
  GTGCAGTAAA GATAGTTAGG GAGGTGGAGT AAAGAGGAGA GGGTTTCCCC ACCATCAAGG
  TGAAGGCCAG TTTGTCCACT TTCTCCTGTT TTCATTTTAA TTATAGGAAT TAGAGCTTTG
  GAGCCGAAGA GATGGCCGAG CCACTAAAGA CTAGGTTCAC AAACAAAAAT ATAAGAAGTT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss46440680	mCV22800237	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs30761911					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147511242 () rs orientation: reverse

Symbol	Name	Function Class
Rr398813	regulatory region 398813	1076 bp upstream
Rr398814	regulatory region 398814	1985 bp upstream
Rr604485	regulatory region 604485	566 bp distal
Rr604486	regulatory region 604486	652 bp distal