rs30759939 SNP Detail

Summary

• ID
  rs30759939
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:89256887 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGTCTCTG TGTATGTGTA
  TGTGTGTCTC TGTGTATGTT TGTGTGTGTC TCTGTGTATG TTTGTGTGTC TGTGTATGTA
  CGTGGTGTGT GCATGACTAT ACGTATGTGG TGTGTATTTG TTTAATTTGT TTGTTTTCAG
  ATAGGGTCAC ACTTTATAGT TCAAACTGGC CTTGAACTTG TGATCCTTCA GCCCCTGCCT
  K
  CTTTGATGTA CAGTTATTAA TTGCCCACCT TTCACACTTT TCATGGGGCA GTTGTCTGCC
  ACTTAGAGCA CTGGATGGTT CTTACACTGA ATGTATGTAC ATAAGTAGAG GGATTTGTCT
  ACCCGATGAC CCAGCGACTC CATTCCTAAC CCCATATATG ACAAGGACGC CCACAAATGC
  CCACAGATTT TATGAAGAAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45961365	mCV23955851	ABI	CRAMUS_MOUSE	f	SNP	T	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30759939					SNP	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:89256887 () rs orientation: forward

Symbol	Name	Function Class
4930512J16Rik	RIKEN cDNA 4930512J16 gene	within coordinates
Rr634089	regulatory region 634089	547 bp proximal
Rr634090	regulatory region 634090	1611 bp proximal