rs30759858 SNP Detail

Summary

• ID
  rs30759858
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:144103073 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGCAACTT GCACTGGAAA
  TAGTTGGTGC AGAAACAACC ACCCTCCTTT TGTTTGTTTG TATTTAAGAC AAATGAAGAA
  AATCCAGATG AATTGGTGTT TTTGCTTTGT TTGTTTCCTT AAAGAGAACA TATTCGCTCA
  TTAGGAAGGC TAGATAGACA ACCAGCCCCG GAAACAGGAG ACTGAAGTCG ATGTCTCTCC
  R
  GAGCTATGAC AAGGACACTT GTCCCCGAGC TCCCCAACCC ACACTGCACA ATACAAAAGG
  GACATCCTGG GTGCACAGCA GAGGGCAGAA TCAACTTGTG CCAAAGATGC CATCTCTTGA
  CAGTGGGGCA GTGCTCTGTG CACTTGGGAC GTCCACTGTG AAGTCATGGA GAAGCCAACA
  GCACCATCCC TTTCTGGCGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45463665	mCV24080304	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss136030733	ENSMUSSNP2051814	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs30759858					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:144103073 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13898	CpG island 13898	521 bp distal
Gm65349	predicted gene, 65349	573 bp upstream
Rr586642	regulatory region 586642	1820 bp distal
Rr586643	regulatory region 586643	594 bp distal
Rr586644	regulatory region 586644	424 bp distal
Rr586645	regulatory region 586645	1998 bp proximal