rs30758955 SNP Detail

Summary

• ID
  rs30758955
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:58393988 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGAAAAAAA ATGAGATTCT
  GGTACAATTT TCCAGCAATG TTGGGATAGC TCTAAGGCAG ATGAAGGTGG ACGGACACAG
  AATAAATATT AATAAATGAC AAGGATCTGT CTTCTAAATT GAATACTTTG TGGACCAATC
  AGGCTTGAGA CACAGAATTG AAATTAGCAC TCCAAAGACA ATAAAAGTAT ACATCTTAAC
  W
  AAAATAGCAA CTTTGAAATA TGTTAAATCT TTAAATATTT TCTTATAGTA GTAATTAATT
  CTGTTGCCAT TTCTTAGTTG TCTCCTTTAA GCAAGTGTAC ATTACCTACC TATGGGTAGA
  GATATGCAAC CAAAACATCC TAATTTTAAG TGTTCTAATA CATTTTGAAA ACATGAAGTT
  AAATACTTAA AATCTGATTG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46980861	NES10793413	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	A	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30758955					SNP	T	T	T	T	T	T	A	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46980861	NES10793413	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:58393988 () rs orientation: forward

Symbol	Name	Function Class
Rr577231	regulatory region 577231	371 bp distal
Rr577232	regulatory region 577232	479 bp distal
Rr577233	regulatory region 577233	761 bp proximal
Rr577234	regulatory region 577234	1621 bp proximal