rs30755913 SNP Detail

Summary

• ID
  rs30755913
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:58363659 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAGAACTT GAAACTGTTC
  AAAATATGGT GGATGTAGTA ATAAAAAAAT AATCAAGGTA TAAATCAACA TTAGATGAAG
  AAAAATTGAA GGGAAAAATA TTTTGTTTCA TTCATCAGTC TCATTTTAAA GGAAGCAGAA
  TCTCTCGCCT CAGCACCACA GAGAACATTC ACCTCATTTG AAACTACTTA AAACTTAACA
  R
  TGTTAATACC TTCATTATAA ATTTGGCCAT TTAAAATGGT GGTTCCCAAA ACCTAAGTTT
  CTATCAGAAT CACTCACAGG GGTTATTAAA TTCATTAACT GTCCTCATTC CAGGAGTGTC
  AGTCTGACTC AGTAGTTCTA GGGCAGATCC AAATGTATCC ACTTCTAGCA AGTTCCCAGA
  TAGTGTTGAT GCAGTATTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ
ss46980733	NES10793784	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ
rs30755913					SNP	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46980733	NES10793784	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:58363659 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr577227	regulatory region 577227			1497 bp distal
Rr577228	regulatory region 577228			1148 bp distal
Rr577229	regulatory region 577229			672 bp distal
Tsc22d2	TSC22 domain family, member 2			Intron
				Noncoding-Transcript-Variant