rs30754906 SNP Detail

Summary

• ID
  rs30754906
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101528979 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTAGCAGC ATGCACAGAG
  AATTAATGAC AATCAGCAAT AAGATAGAAG AATGAAAAAA AATTAAAAGG ACAGTAAGAG
  CTAGGGAGGG AATGTGGTGA AGTGCTCTCT GTGTTAGCAC AAGGACCTGA TTTTGATCTT
  CAGAGCACGT GTGAAAACAC TGGGCCTGGT GGTGAGGGAT TGCAACCCCA GTACAGGGAA
  R
  ACAGATACAG GGGGTCGGAT AGCCGAGCTG AACTGGCAAG TTCTAGCCAC TGTAAGGCCT
  TGTTTCAATA CAAACCAAGG TGGACAGCAC CTAAAGAATG ACACCTGGGG TTGACTTCTG
  GCTTCCACAT GCACACACAC ACACATACAC ACACACACAA GGACAGTGGG CAAGCATAGA
  CAATTTGCAT ATCCTATAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45462075	mCV23811714	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss135548948	ENSMUSSNP5094344	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss320852668	CHEV_3_101425586	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs30754906					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101528979 () rs orientation: forward

Symbol	Name	Function Class
Rr582099	regulatory region 582099	1560 bp proximal