rs30754501 SNP Detail

Summary

• ID
  rs30754501
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:33969921 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAGC AGTGATGCTT CGTGTCCTGG
  R
  GAAGGTCAGC ACTCCATTCA GAAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45960235	mCV27578085	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss133109685	ENSMUSSNP52380	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30754501					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:33969921 () rs orientation: forward

Symbol	Name	Function Class
Gm13853	predicted gene 13853	569 bp upstream
Gm67665	predicted gene, 67665	within coordinates
Rr628235	regulatory region 628235	814 bp distal
Rr628236	regulatory region 628236	85 bp distal
Tssr60221	transcription start site region 60221	777 bp upstream
Tssr60222	transcription start site region 60222	610 bp upstream
Tssr60223	transcription start site region 60223	566 bp upstream