rs30753916 SNP Detail

Summary

• ID
  rs30753916
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:108236657 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGTAAGTTAC TATTATATAC GACAGACTTG TTTGGTATTT
  ATCATATAAA CTGAGTCTAT ATACTCAAGG GTTGCTCCTC AGAATTTGAC CTTGAGTGGG
  R
  CTGAAGACAG CCAGAGATAC CTAGGGTTTC TAGAATCCCT TAGAAGTAAT GCTTGCCTAA
  GGGTAGACTT GAGCCCCTAA CAGCTTCTCT GGATGCTTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45960498	mCV23137483	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss133498470	ENSMUSSNP4435562	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30753916					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108236657 () rs orientation: forward

Symbol	Name	Function Class
Itpr1	inositol 1,4,5-trisphosphate receptor 1	Intron
Rr636067	regulatory region 636067	52 bp proximal
Tssr58057	transcription start site region 58057	1781 bp downstream