rs30752960 SNP Detail

Summary

• ID
  rs30752960
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:89264950 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCAGT TGTGAGACAC CAGGTGGGTG
  R
  TGGGAACTAA ACTCAGGTCC TCTAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45960791	mCV23956217	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss133371449	ENSMUSSNP2668592	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss321851870	CHEV_6_89237962	CHEVERUD	SCREENING_POP	f	SNP			A		G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs30752960					SNP	A	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:89264950 () rs orientation: forward

Symbol	Name	Function Class
Rr379731	regulatory region 379731	1949 bp downstream
Rr379732	regulatory region 379732	within coordinates
Rr634092	regulatory region 634092	1858 bp distal
Rr634093	regulatory region 634093	1757 bp distal
Rr634094	regulatory region 634094	1146 bp distal
Rr634095	regulatory region 634095	683 bp distal
Rr634096	regulatory region 634096	98 bp proximal