rs30752382 SNP Detail

Summary

• ID
  rs30752382
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:107510422 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCTCTCTCA GTGACATAGC CAGAGAATAT AACATGTTTA
  AAGCTACTTC TAAGAAATAA ATCTACCATT ACAGTTATAT TTCTTTCTCC TTTCAACTAA
  Y
  TATAAATAAT CATCAATTAT CATATTAGAG ACTTTTATGT CACCTTAAAT AAGCCATAAA
  CTGTCTATAA AGTATGATAC ATTACAGGCA TAGATACTG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45960425	mCV23133300	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss133484726	ENSMUSSNP6194525	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30752382					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:107510422 () rs orientation: forward

Symbol	Name	Function Class
Lrrn1	leucine rich repeat protein 1, neuronal	Intron
Rr636001	regulatory region 636001	1472 bp distal
Rr636003	regulatory region 636003	1036 bp proximal