rs30752181 SNP Detail

Summary

• ID
  rs30752181
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:60490113 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GCAGCAGCTC GGGACATCTC AGTGTCCTGC CAGCACTATG GTATCCCTAT GAAAAACAGC
  TGCTCCAGCT TGGTACAGTA ATGTAAGAAA AGCTTCTAGA AGATGCAAAC ATATTCCTCA
  GGGTCCACAC TTCTGTCAGG GACTTTTTTA TGTCATATTT AAGAAGAGAG TGGCTACAGT
  TTTCTTTTTT AATAGGGTAT TACAAATGAT TTTGAAGTTT TGATTTGTGC AGGTGCAGGC
  CTGTCGGACT ATTCACCAAA GAGTAGTCCT GGTAATTTCT TATATTAATA ATTAGAGGGG
  K
  TTTTCCTGCT GTTTATTGTG TCAGGATGGC TTTGTGTGTT CCCTTGGCCT GCTTCACTTG
  ATCAGTTTAA GCAGCTGTTT TGCCTTAGGT CATTAGGTAG TAAATAACCA CACAAACTGC
  TATTAACTCT TGGATTTGTT TAATGAGTGC AGTCTTTTTA TACCCTTAGG CCATCTTGCC
  TGGCCTAGGT TCCTGACATC TGAACAGGCA GCTACAAAGA CACCAAGCAC AGGAGTAATC
  TTTGCTTATA TTCAGGTCCC TTCCTGACAC TTTAGTTCAG CCTGCAATAC TCCATCTTAA
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45462045	mCV23103717	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs30752181					SNP	T	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60490113 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm19816	predicted gene, 19816			1332 bp downstream
Mbnl1	muscleblind like splicing regulator 1			Intron
				Noncoding-Transcript-Variant
Rr577432	regulatory region 577432			194 bp distal
Rr577433	regulatory region 577433			53 bp proximal