rs30747851 SNP Detail

Summary

• ID
  rs30747851
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:141986107 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTAAATTA ATACTTCATG
  TAACAATTTA CTTATAAGTA TAGTTTCAGT TCTGGATTTT AATCTGAGGT ACAATTTTAA
  ATTACAATTA TTTAAATTAA GTTAAAAGTC CTATGAAGAT TATTGTAAGC TAACATGTTT
  TAATTTAGGT TGTATTTTTT TATACAAGGG TTTATATAAA TTCTCTCCCC ACTAACACCT
  R
  ATACTTAAAT TTTAAACTTA CTTTTCAAAC ATTAAGGATC TGAGGCACAC TATAAAGAAG
  CTATAAAAAT CTAAGTCATG TGTACTTATG TACATTATGG TTATTTTTCC AGTGATAGAA
  ACAGAACCCA GATCCTCAGC TCTTAGACAA GCATTCCACT GAGTCATGCT CCTAACTCTA
  CACCCTGTCT CAAATATCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45460256	mCV24096241	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A
ss136011748	ENSMUSSNP943144	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		A
ss320999933	CHEV_3_141943310	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30747851					SNP	G	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:141986107 () rs orientation: forward

Symbol	Name	Function Class
Pdlim5	PDZ and LIM domain 5	Intron
Rr586407	regulatory region 586407	79 bp proximal