rs30746702 SNP Detail

Summary

• ID
  rs30746702
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:87084024 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACAT TGAGTATGAA CTTATGGGTC
  R
  TTTGTTAGTT TGGTTGGTTG ATTGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45459538	mCV24904411	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss135455094	ENSMUSSNP5332346	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss320831259	CHEV_3_86980639	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30746702					SNP	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87084024 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13330	CpG island 13330	1680 bp distal
Gm64310	predicted gene, 64310	within coordinates
Kirrel1	kirre like nephrin family adhesion molecule 1	1970 bp upstream
Rr579457	regulatory region 579457	1480 bp distal
Rr579458	regulatory region 579458	957 bp distal
Rr579459	regulatory region 579459	871 bp distal